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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EsxP_2Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family. (98 aa)    
Predicted Functional Partners:
EsxN_1
Type VII secretion protein EsxI; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
  
 
 0.984
FtsK
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family.
  
 
 0.787
EccC2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.787
EsxG
Type VII secretion protein EsxS; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.751
EsxU
Type VII secretion protein EsxU; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
  
 0.736
EsxT
Type VII secretion protein EsxT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
  
 0.702
ORX19534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.671
PPE31_1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.665
PE18_3
PE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
ORX14148.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.612
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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