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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX19258.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (84 aa)    
Predicted Functional Partners:
ORX19392.1
Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.897
HemC
Porphobilinogen deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.753
nrdI
Ribonucleotide reductase; Probably involved in ribonucleotide reductase function.
  
  
 0.749
MsrA
Methionine sulfoxide reductase A; This stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.719
HemD
Bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.710
ORX19259.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.682
ORX10738.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.682
HemA_2
glutamyl-tRNA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.621
HemB
Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.
     
 0.572
ORX21727.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.550
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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