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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX17628.1Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology. (160 aa)    
Predicted Functional Partners:
ORX17627.1
Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
secA-2
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.
       0.816
ORX17629.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.801
raiA
30S ribosomal protein S30; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
       0.727
ORX19810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
CpsY
Sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.491
ORX17592.1
Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.484
CeoB
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.477
CeoC
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.470
ORX21408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.469
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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