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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX21872.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
thiS
Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.892
thiG
Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
       0.874
ThiO
Glycine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.874
ThiE
Thiamine-phosphate diphosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.740
ORX21871.1
Regulator of Sig8; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.636
ORX19997.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.607
ORX21993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.583
ORX21992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.571
LpqL
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.549
ORX09433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.535
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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