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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORX21363.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (504 aa)    
Predicted Functional Partners:
ORX21364.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.793
ORX21365.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.723
ORX21362.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.583
ORX21361.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.582
AWC32_23565
Monooxygenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.551
ORX21910.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.426
ORX21808.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.426
rpsB
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.
    
 
 0.412
atpG
ATP synthase F0F1 subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.406
AtpA
ATP synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.404
Your Current Organism:
Mycobacterium xenopi
NCBI taxonomy Id: 1789
Other names: ATCC 19250, CCUG 28011, CCUG 31306, CIP 104035, DSM 43995, JCM 15661, M. xenopi, Mycobacterium xenopei, NCTC 10042
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