STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_0099Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (110 aa)    
Predicted Functional Partners:
AmDm5_1429
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.998
AmDm5_1430
Pyridine nucleotide-disulfide oxidoreductase family protein associated with PFOR.
  
 0.888
cysC
Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate.
    
 0.861
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
     
 0.811
AmDm5_2898
Dihydropyrimidine dehydrogenase [NADP+].
    
 0.755
AmDm5_0323
Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.745
AmDm5_0978
Succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 
 0.704
AmDm5_2265
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase.
     
 0.622
AmDm5_0682
Hypothetical protein.
  
 
 0.612
AmDm5_0685
Formate dehydrogenase O alpha subunit selenocysteine-containing.
  
 
 0.575
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.