STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_0315Hypothetical protein. (229 aa)    
Predicted Functional Partners:
AmDm5_0366
Hypothetical protein.
  
     0.753
yqjH
Iron-chelator utilization protein.
 
     0.741
AmDm5_1744
Hypothetical protein.
  
     0.732
AmDm5_2379
Hypothetical protein.
  
     0.727
AmDm5_2060
Hypothetical protein.
  
     0.718
AmDm5_1130
Hypothetical protein.
  
     0.703
AmDm5_2447
Hypothetical protein.
  
     0.703
AmDm5_2317
Hypothetical protein.
  
     0.699
AmDm5_0158
Hypothetical protein.
  
     0.692
AmDm5_2444
Hypothetical protein.
  
     0.670
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.