STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_0474Hypothetical protein. (519 aa)    
Predicted Functional Partners:
AmDm5_1307
Glycosyltransferase.
  
     0.760
AmDm5_1690
Hypothetical protein.
  
     0.734
AmDm5_2585
Hypothetical protein.
  
     0.721
AmDm5_0396
Hypothetical protein.
  
     0.711
AmDm5_2379
Hypothetical protein.
  
     0.711
AmDm5_1054
Hypothetical protein.
  
     0.710
AmDm5_0209
Hypothetical protein.
  
     0.690
AmDm5_2447
Hypothetical protein.
  
     0.684
AmDm5_2345
Hypothetical protein.
  
     0.680
AmDm5_1249
Acyl carrier protein.
  
 
   0.666
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.