STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_0599Alpha-ribazole-5'-phosphate phosphatase. (231 aa)    
Predicted Functional Partners:
AmDm5_0453
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase.
 
 
 0.949
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.947
AmDm5_0428
Alpha-ribazole-5'-phosphate phosphatase.
  
  
  0.928
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.769
AmDm5_0598
Hypothetical protein.
       0.762
AmDm5_0458
Adenosylcobinamide-phosphate guanylyltransferase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.
 
 
 0.600
AmDm5_0144
Hypothetical protein.
    
  0.574
AmDm5_1784
Putative phosphoglycerate mutase 2.
  
  
  0.506
AmDm5_0597
dTDP-glucose 4,6-dehydratase.
       0.494
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
    0.480
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
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