STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_0800Putative L-lactate dehydrogenase, hypothetical protein subunit. (195 aa)    
Predicted Functional Partners:
AmDm5_0799
Putative L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF.
 
 
 0.998
lutA
Putative L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE.
 
 
 0.993
AmDm5_0797
Benzoylformate decarboxylase; Belongs to the TPP enzyme family.
       0.682
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
  
 0.570
AmDm5_1427
Phosphate acetyltransferase.
  
  
 0.548
AmDm5_1555
TonB-dependent outer membrane receptor.
  
     0.460
AmDm5_0796
Acetolactate synthase, catabolic; Belongs to the TPP enzyme family.
 
     0.451
AmDm5_1429
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.433
AmDm5_0795
Alpha-acetolactate decarboxylase.
 
     0.424
AmDm5_1529
Carbohydrate-selective porin.
  
     0.407
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.