STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AmDm5_1834Hydrolase, alpha/beta fold family. (269 aa)    
Predicted Functional Partners:
AmDm5_1831
Leucyl aminopeptidase (aminopeptidase T).
 
  
  0.980
AmDm5_1832
N-carbamoylsarcosine amidase.
 
  0.978
maiA
Maleate cis-trans isomerase; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
 
     0.924
AmDm5_1429
Pyruvate-flavodoxin oxidoreductase.
  
 
  0.898
AmDm5_1828
Salicylate hydroxylase.
 
 
 0.810
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.762
AmDm5_1830
Isoquinoline 1-oxidoreductase beta subunit.
 
     0.660
AmDm5_1427
Phosphate acetyltransferase.
  
 
 0.626
AmDm5_1826
Transcriptional regulator, MarR family.
  
     0.610
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
   
  0.593
Your Current Organism:
Acetobacter malorum
NCBI taxonomy Id: 178901
Other names: A. malorum, Acetobacter malorum Cleenwerck et al. 2002, DSM 14337, JCM 17274
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