Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AmDm5_0114 | AmDm5_0247 | AmDm5_0114 | AmDm5_0247 | Hypothetical protein. | Hypothetical protein. | 0.711 |
AmDm5_0114 | AmDm5_2508 | AmDm5_0114 | AmDm5_2508 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.999 |
AmDm5_0114 | AmDm5_2840 | AmDm5_0114 | AmDm5_2840 | Hypothetical protein. | Hypothetical protein. | 0.711 |
AmDm5_0114 | AmDm5_2954 | AmDm5_0114 | AmDm5_2954 | Hypothetical protein. | Glutamate synthase [NADPH] large chain. | 0.419 |
AmDm5_0247 | AmDm5_0114 | AmDm5_0247 | AmDm5_0114 | Hypothetical protein. | Hypothetical protein. | 0.711 |
AmDm5_0247 | AmDm5_2343 | AmDm5_0247 | AmDm5_2343 | Hypothetical protein. | ABC transporter ATP-binding protein. | 0.731 |
AmDm5_0247 | AmDm5_2508 | AmDm5_0247 | AmDm5_2508 | Hypothetical protein. | Sensory box histidine kinase/response regulator. | 0.847 |
AmDm5_0247 | AmDm5_2840 | AmDm5_0247 | AmDm5_2840 | Hypothetical protein. | Hypothetical protein. | 0.961 |
AmDm5_0247 | AmDm5_2841 | AmDm5_0247 | AmDm5_2841 | Hypothetical protein. | ABC transporter related. | 0.997 |
AmDm5_0247 | AmDm5_2954 | AmDm5_0247 | AmDm5_2954 | Hypothetical protein. | Glutamate synthase [NADPH] large chain. | 0.692 |
AmDm5_0247 | argH | AmDm5_0247 | AmDm5_2321 | Hypothetical protein. | Argininosuccinate lyase. | 0.681 |
AmDm5_0247 | cysC | AmDm5_0247 | AmDm5_2668 | Hypothetical protein. | Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. | 0.772 |
AmDm5_0247 | glnQ | AmDm5_0247 | AmDm5_0248 | Hypothetical protein. | Amino acid ABC transporter ATP-binding protein. | 0.999 |
AmDm5_2343 | AmDm5_0247 | AmDm5_2343 | AmDm5_0247 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.731 |
AmDm5_2343 | AmDm5_2840 | AmDm5_2343 | AmDm5_2840 | ABC transporter ATP-binding protein. | Hypothetical protein. | 0.723 |
AmDm5_2508 | AmDm5_0114 | AmDm5_2508 | AmDm5_0114 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.999 |
AmDm5_2508 | AmDm5_0247 | AmDm5_2508 | AmDm5_0247 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.847 |
AmDm5_2508 | AmDm5_2840 | AmDm5_2508 | AmDm5_2840 | Sensory box histidine kinase/response regulator. | Hypothetical protein. | 0.847 |
AmDm5_2508 | AmDm5_2954 | AmDm5_2508 | AmDm5_2954 | Sensory box histidine kinase/response regulator. | Glutamate synthase [NADPH] large chain. | 0.655 |
AmDm5_2839 | AmDm5_2840 | AmDm5_2839 | AmDm5_2840 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.852 |
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