STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KASA_0K02266GATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (917 aa)    
Predicted Functional Partners:
KASA_0E00297G
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
  
 0.918
KASA_0Q07040G
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.901
KASA_0J00198G
annotation not available
  
 0.891
KASA_0O02178G
annotation not available
   
 0.865
KASA_0Q01991G
annotation not available
   
 0.849
KASA_0N02431G
annotation not available
   
 0.837
KASA_0M01496G
annotation not available
   
 0.824
KASA_0Q03916G
Belongs to the PI3/PI4-kinase family.
   
 0.801
KASA_0Q02321G
annotation not available
  
 0.785
KASA_0Q11682G
annotation not available
  
 0.785
Your Current Organism:
Kazachstania saulgeensis
NCBI taxonomy Id: 1789683
Other names: B1-TP1-1, K. saulgeensis, Kazachstania saulgeensis Jacques, Sarilar, Urien, Perrin, Tinsley, Sicard & Casaregola, 2016, Kazachstania sp. B1-TP-13, Kazachstania sp. B1-TP1-1
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