node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBK92315.1 | OBK92696.1 | A5645_23800 | A5645_23270 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
OBK92315.1 | OBK92797.1 | A5645_23800 | A5645_22640 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.955 |
OBK92315.1 | OBK94393.1 | A5645_23800 | A5645_16690 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.990 |
OBK92315.1 | OBK98127.1 | A5645_23800 | A5645_04530 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.948 |
OBK92315.1 | rpsD | A5645_23800 | A5645_19710 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.989 |
OBK92315.1 | rpsE | A5645_23800 | A5645_19935 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.952 |
OBK92315.1 | rpsK | A5645_23800 | A5645_19715 | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.982 |
OBK92696.1 | OBK92315.1 | A5645_23270 | A5645_23800 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.987 |
OBK92696.1 | OBK92797.1 | A5645_23270 | A5645_22640 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 0.911 |
OBK92696.1 | OBK94393.1 | A5645_23270 | A5645_16690 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.995 |
OBK92696.1 | OBK98127.1 | A5645_23270 | A5645_04530 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.970 |
OBK92696.1 | rpsD | A5645_23270 | A5645_19710 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.999 |
OBK92696.1 | rpsE | A5645_23270 | A5645_19935 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.999 |
OBK92696.1 | rpsK | A5645_23270 | A5645_19715 | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family. | 0.999 |
OBK92797.1 | OBK92315.1 | A5645_22640 | A5645_23800 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.955 |
OBK92797.1 | OBK92696.1 | A5645_22640 | A5645_23270 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
OBK92797.1 | OBK94393.1 | A5645_22640 | A5645_16690 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 3'-5' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.826 |
OBK92797.1 | OBK98127.1 | A5645_22640 | A5645_04530 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.914 |
OBK92797.1 | rpsD | A5645_22640 | A5645_19710 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.908 |
OBK92797.1 | rpsE | A5645_22640 | A5645_19935 | DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.889 |