STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBK96018.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)    
Predicted Functional Partners:
OBK92848.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.638
OBK91741.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
OBK95880.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.546
OBK95979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
OBK95980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.542
OBK95873.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.542
OBK96776.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.538
OBK96296.1
DtxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.538
OBK94172.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.538
OBK95699.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.537
Your Current Organism:
Mycobacterium asiaticum
NCBI taxonomy Id: 1790
Other names: ATCC 25276, CCUG 29115, CIP 106809, DSM 44297, JCM 6409, M. asiaticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.