STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5645_13105Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)    
Predicted Functional Partners:
OBK92218.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.850
OBK94453.1
Carbamoyl-phosphate-synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.803
OBK95964.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.791
OBK96492.1
methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.781
OBK96493.1
methylmalonyl-CoA mutase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.781
OBK96577.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.725
A5645_08375
Fatty acyl-AMP ligase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.725
OBK95079.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.725
OBK98318.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
OBK98319.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.719
Your Current Organism:
Mycobacterium asiaticum
NCBI taxonomy Id: 1790
Other names: ATCC 25276, CCUG 29115, CIP 106809, DSM 44297, JCM 6409, M. asiaticum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.