Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001049355_00161 | GCA_001049355_00163 | GCA_001049355_00161 | GCA_001049355_00163 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein. | 0.800 |
GCA_001049355_00161 | alr | GCA_001049355_00161 | GCA_001049355_00157 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.917 |
GCA_001049355_00161 | cpo_1 | GCA_001049355_00161 | GCA_001049355_00158 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein. | 0.891 |
GCA_001049355_00161 | gadB | GCA_001049355_00161 | GCA_001049355_00156 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein; Belongs to the group II decarboxylase family. | 0.770 |
GCA_001049355_00161 | gcp | GCA_001049355_00161 | GCA_001049355_00162 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.943 |
GCA_001049355_00161 | nnr | GCA_001049355_00161 | GCA_001049355_00155 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | 0.760 |
GCA_001049355_00161 | ydiB | GCA_001049355_00161 | GCA_001049355_00159 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein. | 0.954 |
GCA_001049355_00161 | yeaZ | GCA_001049355_00161 | GCA_001049355_00160 | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | Unannotated protein. | 0.986 |
GCA_001049355_00163 | GCA_001049355_00161 | GCA_001049355_00163 | GCA_001049355_00161 | Unannotated protein. | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.800 |
GCA_001049355_00163 | alr | GCA_001049355_00163 | GCA_001049355_00157 | Unannotated protein. | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.800 |
GCA_001049355_00163 | cpo_1 | GCA_001049355_00163 | GCA_001049355_00158 | Unannotated protein. | Unannotated protein. | 0.800 |
GCA_001049355_00163 | gadB | GCA_001049355_00163 | GCA_001049355_00156 | Unannotated protein. | Unannotated protein; Belongs to the group II decarboxylase family. | 0.706 |
GCA_001049355_00163 | gcp | GCA_001049355_00163 | GCA_001049355_00162 | Unannotated protein. | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.800 |
GCA_001049355_00163 | nnr | GCA_001049355_00163 | GCA_001049355_00155 | Unannotated protein. | Unannotated protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family. | 0.692 |
GCA_001049355_00163 | ydiB | GCA_001049355_00163 | GCA_001049355_00159 | Unannotated protein. | Unannotated protein. | 0.800 |
GCA_001049355_00163 | yeaZ | GCA_001049355_00163 | GCA_001049355_00160 | Unannotated protein. | Unannotated protein. | 0.800 |
alr | GCA_001049355_00161 | GCA_001049355_00157 | GCA_001049355_00161 | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Unannotated protein; Acetylates the N-terminal alanine of ribosomal protein S18. | 0.917 |
alr | GCA_001049355_00163 | GCA_001049355_00157 | GCA_001049355_00163 | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Unannotated protein. | 0.800 |
alr | cpo_1 | GCA_001049355_00157 | GCA_001049355_00158 | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Unannotated protein. | 0.891 |
alr | gadB | GCA_001049355_00157 | GCA_001049355_00156 | Unannotated protein; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | Unannotated protein; Belongs to the group II decarboxylase family. | 0.727 |
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