Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001049355_01269 | GCA_001049355_01270 | GCA_001049355_01269 | GCA_001049355_01270 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_001049355_01269 | GCA_001049355_01274 | GCA_001049355_01269 | GCA_001049355_01274 | Unannotated protein. | Unannotated protein. | 0.617 |
GCA_001049355_01269 | nudF_1 | GCA_001049355_01269 | GCA_001049355_01267 | Unannotated protein. | Unannotated protein. | 0.752 |
GCA_001049355_01269 | ppnK | GCA_001049355_01269 | GCA_001049355_01272 | Unannotated protein. | Unannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.648 |
GCA_001049355_01269 | pyrG | GCA_001049355_01269 | GCA_001049355_01268 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.752 |
GCA_001049355_01269 | recN | GCA_001049355_01269 | GCA_001049355_01271 | Unannotated protein. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.648 |
GCA_001049355_01269 | tlyA | GCA_001049355_01269 | GCA_001049355_01273 | Unannotated protein. | Unannotated protein. | 0.740 |
GCA_001049355_01269 | xerD_3 | GCA_001049355_01269 | GCA_001049355_01266 | Unannotated protein. | Unannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.754 |
GCA_001049355_01269 | yutF | GCA_001049355_01269 | GCA_001049355_01275 | Unannotated protein. | Unannotated protein. | 0.608 |
GCA_001049355_01270 | GCA_001049355_01269 | GCA_001049355_01270 | GCA_001049355_01269 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_001049355_01270 | GCA_001049355_01274 | GCA_001049355_01270 | GCA_001049355_01274 | Unannotated protein. | Unannotated protein. | 0.619 |
GCA_001049355_01270 | lytR_1 | GCA_001049355_01270 | GCA_001049355_00386 | Unannotated protein. | Unannotated protein. | 0.726 |
GCA_001049355_01270 | nudF_1 | GCA_001049355_01270 | GCA_001049355_01267 | Unannotated protein. | Unannotated protein. | 0.750 |
GCA_001049355_01270 | ppnK | GCA_001049355_01270 | GCA_001049355_01272 | Unannotated protein. | Unannotated protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.651 |
GCA_001049355_01270 | pyrG | GCA_001049355_01270 | GCA_001049355_01268 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.750 |
GCA_001049355_01270 | recN | GCA_001049355_01270 | GCA_001049355_01271 | Unannotated protein. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.719 |
GCA_001049355_01270 | tlyA | GCA_001049355_01270 | GCA_001049355_01273 | Unannotated protein. | Unannotated protein. | 0.769 |
GCA_001049355_01270 | xerD_3 | GCA_001049355_01270 | GCA_001049355_01266 | Unannotated protein. | Unannotated protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.784 |
GCA_001049355_01270 | yutF | GCA_001049355_01270 | GCA_001049355_01275 | Unannotated protein. | Unannotated protein. | 0.610 |
GCA_001049355_01274 | GCA_001049355_01269 | GCA_001049355_01274 | GCA_001049355_01269 | Unannotated protein. | Unannotated protein. | 0.617 |
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