STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_01818Unannotated protein. (516 aa)    
Predicted Functional Partners:
ispB
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 
 0.866
GCA_001049355_01438
Unannotated protein.
 
  
 
0.838
GCA_001049355_01816
Unannotated protein.
 
     0.802
GCA_001049355_01815
Unannotated protein.
 
     0.785
GCA_001049355_03394
Unannotated protein.
  
  
  0.665
GCA_001049355_03412
Unannotated protein.
  
     0.664
GCA_001049355_02314
Unannotated protein.
  
     0.622
GCA_001049355_03291
Unannotated protein.
  
     0.611
GCA_001049355_00398
Unannotated protein.
 
     0.606
GCA_001049355_00148
Unannotated protein.
  
     0.599
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.