Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
atpA | ethA_1 | GCA_001049355_05481 | GCA_001049355_04467 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | ethA_2 | GCA_001049355_05481 | GCA_001049355_00893 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | hapE_6 | GCA_001049355_05481 | GCA_001049355_01981 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | hapE_9 | GCA_001049355_05481 | GCA_001049355_03872 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | pamO_2 | GCA_001049355_05481 | GCA_001049355_00580 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | pamO_5 | GCA_001049355_05481 | GCA_001049355_03883 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
atpA | pamO_7 | GCA_001049355_05481 | GCA_001049355_02836 | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Unannotated protein. | 0.547 |
ethA_1 | atpA | GCA_001049355_04467 | GCA_001049355_05481 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.547 |
ethA_1 | hapE_6 | GCA_001049355_04467 | GCA_001049355_01981 | Unannotated protein. | Unannotated protein. | 0.567 |
ethA_2 | atpA | GCA_001049355_00893 | GCA_001049355_05481 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.547 |
ethA_2 | hapE_6 | GCA_001049355_00893 | GCA_001049355_01981 | Unannotated protein. | Unannotated protein. | 0.562 |
fabR_2 | hapE_6 | GCA_001049355_01982 | GCA_001049355_01981 | Unannotated protein. | Unannotated protein. | 0.603 |
fabR_2 | nrdF | GCA_001049355_01982 | GCA_001049355_01980 | Unannotated protein. | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.475 |
hapE_6 | atpA | GCA_001049355_01981 | GCA_001049355_05481 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.547 |
hapE_6 | ethA_1 | GCA_001049355_01981 | GCA_001049355_04467 | Unannotated protein. | Unannotated protein. | 0.567 |
hapE_6 | ethA_2 | GCA_001049355_01981 | GCA_001049355_00893 | Unannotated protein. | Unannotated protein. | 0.562 |
hapE_6 | fabR_2 | GCA_001049355_01981 | GCA_001049355_01982 | Unannotated protein. | Unannotated protein. | 0.603 |
hapE_6 | hapE_9 | GCA_001049355_01981 | GCA_001049355_03872 | Unannotated protein. | Unannotated protein. | 0.686 |
hapE_6 | lipR | GCA_001049355_01981 | GCA_001049355_04628 | Unannotated protein. | Unannotated protein. | 0.484 |
hapE_6 | nrdF | GCA_001049355_01981 | GCA_001049355_01980 | Unannotated protein. | Unannotated protein; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.497 |
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