STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_02027Unannotated protein. (317 aa)    
Predicted Functional Partners:
GCA_001049355_02029
Unannotated protein.
 
     0.796
GCA_001049355_02028
Unannotated protein.
       0.761
fgd_3
Unannotated protein.
  
     0.754
fgd1_7
Unannotated protein.
  
     0.721
GCA_001049355_01571
Unannotated protein.
  
     0.718
fgd1_11
Unannotated protein.
  
     0.700
fgd1_3
Unannotated protein.
  
     0.684
rutA_4
Unannotated protein.
  
     0.676
fgd_1
Unannotated protein.
  
     0.668
GCA_001049355_02293
Unannotated protein.
  
   
 0.667
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.