Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001049355_02113 | GCA_001049355_02196 | GCA_001049355_02113 | GCA_001049355_02196 | Unannotated protein. | Unannotated protein. | 0.614 |
GCA_001049355_02196 | GCA_001049355_02113 | GCA_001049355_02196 | GCA_001049355_02113 | Unannotated protein. | Unannotated protein. | 0.614 |
GCA_001049355_02196 | GCA_001049355_02620 | GCA_001049355_02196 | GCA_001049355_02620 | Unannotated protein. | Unannotated protein. | 0.767 |
GCA_001049355_02196 | GCA_001049355_04703 | GCA_001049355_02196 | GCA_001049355_04703 | Unannotated protein. | Unannotated protein. | 0.567 |
GCA_001049355_02196 | gltB_1 | GCA_001049355_02196 | GCA_001049355_03973 | Unannotated protein. | Unannotated protein. | 0.707 |
GCA_001049355_02196 | gltB_4 | GCA_001049355_02196 | GCA_001049355_00910 | Unannotated protein. | Unannotated protein. | 0.707 |
GCA_001049355_02196 | guaA_1 | GCA_001049355_02196 | GCA_001049355_00187 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.596 |
GCA_001049355_02196 | mbtB_3 | GCA_001049355_02196 | GCA_001049355_03200 | Unannotated protein. | Unannotated protein. | 0.768 |
GCA_001049355_02196 | metH | GCA_001049355_02196 | GCA_001049355_01760 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.647 |
GCA_001049355_02196 | qcrC | GCA_001049355_02196 | GCA_001049355_01838 | Unannotated protein. | Unannotated protein. | 0.907 |
GCA_001049355_02196 | ygaD | GCA_001049355_02196 | GCA_001049355_01000 | Unannotated protein. | Unannotated protein; Belongs to the CinA family. | 0.731 |
GCA_001049355_02620 | GCA_001049355_02196 | GCA_001049355_02620 | GCA_001049355_02196 | Unannotated protein. | Unannotated protein. | 0.767 |
GCA_001049355_04703 | GCA_001049355_02196 | GCA_001049355_04703 | GCA_001049355_02196 | Unannotated protein. | Unannotated protein. | 0.567 |
gltB_1 | GCA_001049355_02196 | GCA_001049355_03973 | GCA_001049355_02196 | Unannotated protein. | Unannotated protein. | 0.707 |
gltB_1 | gltB_4 | GCA_001049355_03973 | GCA_001049355_00910 | Unannotated protein. | Unannotated protein. | 0.999 |
gltB_1 | guaA_1 | GCA_001049355_03973 | GCA_001049355_00187 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.984 |
gltB_1 | metH | GCA_001049355_03973 | GCA_001049355_01760 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.516 |
gltB_1 | qcrC | GCA_001049355_03973 | GCA_001049355_01838 | Unannotated protein. | Unannotated protein. | 0.761 |
gltB_4 | GCA_001049355_02196 | GCA_001049355_00910 | GCA_001049355_02196 | Unannotated protein. | Unannotated protein. | 0.707 |
gltB_4 | gltB_1 | GCA_001049355_00910 | GCA_001049355_03973 | Unannotated protein. | Unannotated protein. | 0.999 |
page 1 of 2