STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_02368Unannotated protein. (375 aa)    
Predicted Functional Partners:
luxQ_2
Unannotated protein.
  
 0.944
GCA_001049355_02370
Unannotated protein.
 
     0.771
resA_1
Unannotated protein.
   
   0.754
ccmF
Unannotated protein.
  
    0.728
dipZ
Unannotated protein.
       0.723
GCA_001049355_02373
Unannotated protein.
       0.722
hemL2
Unannotated protein.
       0.720
GCA_001049355_02375
Unannotated protein; Belongs to the purine-cytosine permease (2.A.39) family.
       0.481
cheB2
Unannotated protein.
  
  
 0.470
GCA_001049355_05147
Unannotated protein; Belongs to the UPF0336 family.
  
   
 0.468
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.