STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_03519Unannotated protein. (196 aa)    
Predicted Functional Partners:
GCA_001049355_03518
Unannotated protein; Belongs to the cytochrome P450 family.
 
    0.913
GCA_001049355_03517
Unannotated protein.
       0.575
GCA_001049355_00613
Unannotated protein.
  
     0.552
GCA_001049355_01071
Unannotated protein.
  
     0.547
GCA_001049355_05023
Unannotated protein.
  
     0.494
GCA_001049355_00939
Unannotated protein.
  
     0.462
fabR_2
Unannotated protein.
  
   
 0.441
GCA_001049355_00814
Unannotated protein.
  
     0.411
GCA_001049355_03516
Unannotated protein.
       0.407
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.