Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cysNC_1 | cysNC_2 | GCA_001049355_02571 | GCA_001049355_03474 | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.994 |
cysNC_1 | pstA | GCA_001049355_02571 | GCA_001049355_03697 | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | Unannotated protein. | 0.685 |
cysNC_2 | cysNC_1 | GCA_001049355_03474 | GCA_001049355_02571 | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family. | 0.994 |
cysNC_2 | pstA | GCA_001049355_03474 | GCA_001049355_03697 | Unannotated protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | Unannotated protein. | 0.685 |
luxQ_2 | modA | GCA_001049355_01526 | GCA_001049355_05261 | Unannotated protein. | Unannotated protein. | 0.427 |
luxQ_2 | phoU | GCA_001049355_01526 | GCA_001049355_03695 | Unannotated protein. | Unannotated protein; Plays a role in the regulation of phosphate uptake. | 0.576 |
luxQ_2 | ppk | GCA_001049355_01526 | GCA_001049355_00751 | Unannotated protein. | Unannotated protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.524 |
luxQ_2 | pstA | GCA_001049355_01526 | GCA_001049355_03697 | Unannotated protein. | Unannotated protein. | 0.589 |
luxQ_2 | pstB3 | GCA_001049355_01526 | GCA_001049355_03696 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.848 |
luxQ_2 | pstS3 | GCA_001049355_01526 | GCA_001049355_03699 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.799 |
luxQ_2 | senX3_1 | GCA_001049355_01526 | GCA_001049355_02406 | Unannotated protein. | Unannotated protein. | 0.998 |
modA | luxQ_2 | GCA_001049355_05261 | GCA_001049355_01526 | Unannotated protein. | Unannotated protein. | 0.427 |
modA | pstA | GCA_001049355_05261 | GCA_001049355_03697 | Unannotated protein. | Unannotated protein. | 0.649 |
modA | pstB3 | GCA_001049355_05261 | GCA_001049355_03696 | Unannotated protein. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.532 |
phoU | luxQ_2 | GCA_001049355_03695 | GCA_001049355_01526 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.576 |
phoU | pstA | GCA_001049355_03695 | GCA_001049355_03697 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.980 |
phoU | pstB3 | GCA_001049355_03695 | GCA_001049355_03696 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.988 |
phoU | pstC | GCA_001049355_03695 | GCA_001049355_03698 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.894 |
phoU | pstS3 | GCA_001049355_03695 | GCA_001049355_03699 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. | 0.870 |
phoU | senX3_1 | GCA_001049355_03695 | GCA_001049355_02406 | Unannotated protein; Plays a role in the regulation of phosphate uptake. | Unannotated protein. | 0.746 |
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