STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_03892Unannotated protein. (375 aa)    
Predicted Functional Partners:
GCA_001049355_03893
Unannotated protein.
 
  
 0.985
GCA_001049355_03894
Unannotated protein.
 
    0.953
hsaC_3
Unannotated protein.
 
     0.786
kshA_6
Unannotated protein.
 
     0.779
kshA_5
Unannotated protein.
 
     0.775
kshA_2
Unannotated protein.
 
     0.772
GCA_001049355_00619
Unannotated protein.
 
    0.759
baiE_1
Unannotated protein.
  
    0.749
GCA_001049355_04737
Unannotated protein.
 
    0.722
hsaC_2
Unannotated protein.
 
     0.721
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.