STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001049355_05629Unannotated protein. (167 aa)    
Predicted Functional Partners:
GCA_001049355_05630
Unannotated protein.
       0.778
mdh_2
Unannotated protein.
       0.773
rhtA_4
Unannotated protein.
 
     0.754
GCA_001049355_05632
Unannotated protein.
       0.723
gno_6
Unannotated protein.
       0.676
GCA_001049355_05635
Unannotated protein.
       0.490
tesB_6
Unannotated protein.
       0.490
coaE
Unannotated protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
    
  0.462
GCA_001049355_03397
Unannotated protein.
  
     0.458
ydgH_2
Unannotated protein.
  
     0.451
Your Current Organism:
Mycolicibacterium aurum
NCBI taxonomy Id: 1791
Other names: ATCC 23366, CCUG 37666, CIP 104465, DSM 43999, HAMBI 2275, JCM 6366, LMG 19255, LMG:19255, M. aurum, Mycobacterium aurum, NCTC 10437, NRRL B-4037
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.