STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBS31982.1Phage tail sheath protein. (517 aa)    
Predicted Functional Partners:
SBS31962.1
Gene 25-like lysozyme.
 
 
 0.997
SBS31973.1
Hypothetical protein.
 
 
 0.993
SBS31969.1
Phage-related baseplate assembly protein.
 
 
 0.992
SBS31980.1
T4-like virus tail tube protein gp19.
 
 
 0.990
SBS31955.1
Hypothetical protein.
 
 
 
 0.989
SBS31961.1
Hypothetical protein.
 
 
 0.987
SBS31988.1
Hypothetical protein.
 
 
 
 0.987
SBS31976.1
T4-like virus tail tube protein gp19.
 
 
 0.986
SBS33548.1
Phage late control gene D protein (GPD).
  
 
 0.954
SBS30442.1
Baseplate J-like protein.
  
 
 0.947
Your Current Organism:
Marinomonas spartinae
NCBI taxonomy Id: 1792290
Other names: CECT 8886, KCTC 42958, M. spartinae, Marinomonas spartinae Lucena et al. 2016, strain SMJ19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.