STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMJ60200.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
AMJ62022.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.586
AMJ63201.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.583
AMJ62021.1
NADH-ubiquinone oxidoreductase subunit 6; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.578
AMJ62936.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 
 0.563
AMJ59742.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.536
AMJ60201.1
Ala-tRNA(Pro) hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.534
AMJ60550.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.504
AMJ62974.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.500
AMJ62789.1
Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.496
AMJ62918.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.471
Your Current Organism:
Bosea sp. PAMC26642
NCBI taxonomy Id: 1792307
Other names: B. sp. PAMC 26642, Bosea sp. PAMC 26642
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