STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002000055_01591Unannotated protein. (313 aa)    
Predicted Functional Partners:
GCA_002000055_01590
Unannotated protein.
 
  0.984
GCA_002000055_01589
Unannotated protein.
 
    0.946
GCA_002000055_01588
Unannotated protein.
 
     0.933
GCA_002000055_02814
Unannotated protein.
 
 
 0.926
GCA_002000055_01963
Unannotated protein.
  
  
 
0.905
GCA_002000055_01633
Unannotated protein.
  
  
 
0.904
GCA_002000055_00434
Unannotated protein.
   
 
  0.900
GCA_002000055_00435
Unannotated protein.
   
 
  0.899
GCA_002000055_02130
Unannotated protein.
 
  
 
0.883
GCA_002000055_00519
Unannotated protein.
 
  0.784
Your Current Organism:
Marinicella sediminis
NCBI taxonomy Id: 1792834
Other names: KCTC 42953, M. sediminis, MCCC 1H00149, Marinicella sp. F2, strain F2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.