STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078685_00469Unannotated protein. (188 aa)    
Predicted Functional Partners:
GCA_900078685_00117
Unannotated protein.
  
 
 0.762
GCA_900078685_01718
Unannotated protein.
  
     0.699
GCA_900078685_03070
Unannotated protein.
  
 
 0.675
GCA_900078685_02502
Unannotated protein.
    
  0.664
GCA_900078685_00465
Unannotated protein.
 
     0.614
GCA_900078685_00466
Unannotated protein.
 
     0.592
GCA_900078685_02665
Unannotated protein.
  
 
 0.590
GCA_900078685_00518
Unannotated protein.
    
 0.583
GCA_900078685_01083
Unannotated protein.
  
 
 0.582
GCA_900078685_02664
Unannotated protein.
   
 
 0.582
Your Current Organism:
Mycolicibacter icosiumassiliensis
NCBI taxonomy Id: 1792835
Other names: CSUR P1561, DSM 100711, M. icosiumassiliensis, Mycobacterium icosiumassiliensis, Mycobacterium sp. 8WA6, strain 8WA6
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.