STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900078685_04100Unannotated protein. (340 aa)    
Predicted Functional Partners:
GCA_900078685_04099
Unannotated protein.
 
     0.865
GCA_900078685_04098
Unannotated protein.
  
 
  0.827
GCA_900078685_02773
Unannotated protein.
  
 
 0.810
GCA_900078685_03286
Unannotated protein.
    
 0.777
GCA_900078685_03516
Unannotated protein.
  
  
 0.749
GCA_900078685_01579
Unannotated protein.
 
 
  0.739
GCA_900078685_02128
Unannotated protein.
 
 
 0.739
GCA_900078685_04005
Unannotated protein.
  
 
 0.738
GCA_900078685_01080
Unannotated protein.
 
 0.723
GCA_900078685_03511
Unannotated protein.
     
 0.716
Your Current Organism:
Mycolicibacter icosiumassiliensis
NCBI taxonomy Id: 1792835
Other names: CSUR P1561, DSM 100711, M. icosiumassiliensis, Mycobacterium icosiumassiliensis, Mycobacterium sp. 8WA6, strain 8WA6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.