STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV07622.1Bacterioferritin; Iron-storage protein. (182 aa)    
Predicted Functional Partners:
ORV03486.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
     
 0.798
ORU96790.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.716
ORU98664.1
Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.610
ORV03153.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.572
ORV03154.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.572
ORV07777.1
LytTR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.527
ORV02058.1
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
     
 0.512
ORU95602.1
Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.510
ORV07621.1
Bacterioferritin; Iron-storage protein.
 
    
0.509
rpsP
30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.428
Your Current Organism:
Mycolicibacterium fallax
NCBI taxonomy Id: 1793
Other names: ATCC 35219, CCUG 37584, CIP 81.39, DSM 44179, JCM 6405, M. fallax, Mycobacterium fallax
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