Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORV04357.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (204 aa)    
Predicted Functional Partners:
ORV04356.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.807
ORV04358.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.807
ORV04359.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.807
ORV04360.1
CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.804
ORV04378.1
Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
ORV04355.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
ORV04354.1
N(G),N(G)-dimethylarginine dimethylaminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORV04361.1
Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.701
whiB-5
WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.678
Your Current Organism:
Mycolicibacterium fallax
NCBI taxonomy Id: 1793
Other names: ATCC 35219, CCUG 37584, CIP 81.39, DSM 44179, JCM 6405, M. fallax, Mycobacterium fallax
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