STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001592845_01549Unannotated protein. (499 aa)    
Predicted Functional Partners:
GCA_001592845_02454
Unannotated protein.
 
 
 
0.874
GCA_001592845_03066
Unannotated protein.
 
 
 0.858
GCA_001592845_00967
Unannotated protein.
 
  
  0.854
GCA_001592845_03407
Unannotated protein.
    
 0.819
GCA_001592845_03022
Unannotated protein.
  
 
  0.812
GCA_001592845_02866
Unannotated protein.
 
 
 0.784
GCA_001592845_00307
Unannotated protein.
    
  0.783
GCA_001592845_00152
Unannotated protein.
    
  0.775
GCA_001592845_01143
Unannotated protein.
    
 0.759
GCA_001592845_00568
Unannotated protein.
  
 
 0.750
Your Current Organism:
Halobacillus sp. KGW1
NCBI taxonomy Id: 1793726
Other names: H. sp. KGW1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.