STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ04705.1PFAM: PspA/IM30 family; COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: ter:Tery_4081 phage shock protein A, PspA; PFAM: PspA/IM30; SPTR: Phage shock protein A, PspA. (312 aa)    
Predicted Functional Partners:
AFZ08706.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001789:IPR001610:IPR003661:IPR 003594:IPR008207:IPR013655:IPR013767; KEGG: syp:SYNPCC7002_A1261 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; Signal transduction response regulator, receiver domain [...]
    
 
 0.904
AFZ08604.1
Multi-sensor hybrid histidine kinase; PFAM: CBS domain; Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR000644:IPR001610:IPR003018:IPR 003661:IPR003594:IPR001789:IPR013655:IPR013767:IPR008207; KEGG: ter:Tery_4447 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domai [...]
   
 
 0.772
AFZ05106.1
Multi-sensor hybrid histidine kinase; PFAM: GAF domain; HAMP domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CHASE4 domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR007892:IPR003660:IPR013655:IPR 003018:IPR003661:IPR003594:IPR001789:IPR008207:IPR001610; KEGG: ter:Tery_0943 multi-sensor hybrid histidine kinase; PFAM: CHASE4; HAMP linker domain; PAS fold-3; GAF; Signal transduction histidine kinase, subgroup 1, dimeri [...]
    
 
 0.771
AFZ05847.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR003660:IPR003018:IPR013655:IPR 013656:IPR003661:IPR003594:IPR001789:IPR008207:IPR001610; KEGG: npu:Npun_F2363 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; GAF; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domai [...]
    
 
 0.771
AFZ09225.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR013656:IPR013655:IPR013767:IPR 003018:IPR003661:IPR003594:IPR001789:IPR008207:IPR001610; KEGG: cya:CYA_2836 sensory box histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS fold-4; PAS fold-3; PAS fold [...]
    
 
 0.771
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.760
AFZ08521.1
Nitrogen assimilation regulatory protein; PFAM: Sigma-54 interaction domain; Cyclic nucleotide-binding domain; COGs: COG1221 Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain; InterPro IPR000595:IPR002078:IPR001450; KEGG: npu:Npun_R5863 cyclic nucleotide-binding protein; PFAM: RNA polymerase sigma factor 54, interaction; Cyclic nucleotide-binding domain; 4Fe-4S binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide-binding protein.
 
 
 
 0.758
AFZ06814.1
Hypothetical protein; PFAM: Chloroplast import component protein (Tic20); KEGG: ter:Tery_3886 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.743
AFZ08993.1
KEGG: cyn:Cyan7425_3374 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.738
AFZ04858.1
KEGG: ava:Ava_3434 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.737
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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