STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ04862.1PFAM: HlyD family secretion protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: npu:Npun_F3670 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD family protein. (560 aa)    
Predicted Functional Partners:
AFZ08219.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR011701; KEGG: cyj:Cyan7822_2243 EmrB/QacA subfamily drug resistance transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily.
 
 0.878
AFZ05418.1
PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701:IPR004638; KEGG: npu:Npun_F3672 EmrB/QacA family drug resistance transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily.
 
 0.842
AFZ08518.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ter:Tery_4505 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein.
 
 
 0.711
AFZ08812.1
Hypothetical protein; KEGG: rle:pRL120270 putative exonuclease; SPTR: Putative uncharacterized protein.
  
 
 0.613
AFZ04863.1
PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: ana:alr4692 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator.
  
  
 0.520
AFZ10177.1
PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: NHLM bacteriocin system ABC transporter, ATP-binding protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003593:IPR022515:IPR001140:IPR003439; KEGG: npu:Npun_F5052 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; TI [...]
 
 
 0.500
AFZ10176.1
PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR022514:IPR005074:IPR001140:IPR 003439; KEGG: cyn:Cyan7425_3040 ABC transporter related; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; [...]
 
 
 0.481
AFZ09704.1
GAF sensor hybrid histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660:IPR003018:IPR003661:IPR003594:IPR 001789; KEGG: ava:Ava_4696 GAF sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; HAMP linker domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-bindin [...]
 
  
 0.479
AFZ10260.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter transmembrane region; Peptidase C39 family; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003593:IPR000595:IPR005074:IPR001140:IPR 003439; KEGG: cyc:PCC7424_3519 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; PFAM: ABC transporter-like; Peptidase C39, bacterio [...]
  
 
 0.456
AFZ04740.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; Cyclic nucleotide-binding domain; TIGRFAM: type I secretion system ABC transporter, HlyB family; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR000595:IPR005074:IPR001140:IPR003439:IPR 003593; KEGG: ter:Tery_1352 cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-bi [...]
  
 
 0.453
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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