STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ04907.1Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport; COGs: COG5637 integral membrane protein; InterPro IPR005031; KEGG: ava:Ava_4497 cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; SPTR: Streptomyces cyclase/dehydrase. (230 aa)    
Predicted Functional Partners:
AFZ09203.1
PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: npu:Npun_R2418 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; SPTR: Alcohol dehydrogenase GroES domain protein.
 
    0.784
AFZ04908.1
KEGG: cyn:Cyan7425_3832 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.766
AFZ05645.1
Protein of unknown function DUF2231, transmembrane; PFAM: Predicted membrane protein (DUF2231); COGs: COG4244 membrane protein; InterPro IPR019251; KEGG: naz:Aazo_1488 hypothetical protein; PFAM: Protein of unknown function DUF2231, transmembrane; SPTR: Putative uncharacterized protein.
  
     0.670
AFZ08254.1
Hypothetical protein; PFAM: Domain of unknown function (DUF305); COGs: COG3652 outer membrane protein; KEGG: cyj:Cyan7822_3721 outer membrane protein; SPTR: Outer membrane protein.
  
    0.573
AFZ05498.1
Maltooligosyl trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase; COGs: COG3280 Maltooligosyl trehalose synthase; InterPro IPR006589:IPR006047:IPR012767; KEGG: npu:Npun_F5706 malto-oligosyltrehalose synthase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Maltooligosyltrehalose synthase; TIGRFAM: Malto-oligosyltrehalose synthase.
  
    0.479
AFZ04898.1
KEGG: cyj:Cyan7822_3714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
AFZ07613.1
3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cyj:Cyan7822_2749 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Oxidoreductase.
  
     0.429
AFZ04909.1
KEGG: cyj:Cyan7822_3250 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.426
AFZ07612.1
PFAM: Hemerythrin HHE cation binding domain; COGs: COG5592 conserved hypothetical protein; InterPro IPR012312; KEGG: ava:Ava_3897 hemerythrin HHE cation binding region; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin HHE cation binding region.
  
     0.421
AFZ09403.1
UDP-galactopyranose mutase; PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; KEGG: npu:Npun_F0220 UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase.
  
     0.420
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.