STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ04997.1PFAM: Uncharacterized protein conserved in bacteria (DUF2263); TIGRFAM: TIGR02452 family protein; COGs: COG4295 conserved hypothetical protein; InterPro IPR012664:IPR019261; KEGG: ana:alr1372 hypothetical protein; PFAM: Protein of unknown function DUF2263; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02452. (281 aa)    
Predicted Functional Partners:
AFZ09124.1
Lipolytic protein G-D-S-L family; PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: npu:Npun_F4198 GDSL family lipase; PFAM: Lipase, GDSL; SPTR: Lipolytic enzyme, G-D-S-L family.
 
     0.909
AFZ10388.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused; COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: ana:all5029 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02464.
 
     0.674
AFZ05406.1
Hypothetical protein; PFAM: Domain of unknown function (DUF1768); TIGRFAM: conserved hypothetical protein, ribA/ribD-fused; COGs: COG3236 conserved hypothetical protein; InterPro IPR012816; KEGG: npu:Npun_F1822 hypothetical protein; PFAM: Conserved hypothetical protein CHP02464; SPTR: Swarming motility protein ybiA; TIGRFAM: Conserved hypothetical protein CHP02464.
 
     0.665
AFZ09074.1
Appr-1-p processing domain protein; PFAM: Macro domain; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: plm:Plim_3377 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Appr-1-p processing domain protein.
 
   
 0.657
AFZ04998.1
Hypothetical protein; TIGRFAM: clan AA aspartic protease, AF_0612 family; KEGG: cyh:Cyan8802_2636 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.590
AFZ07639.1
tRNA(His)-5'-guanylyltransferase; PFAM: tRNAHis guanylyltransferase; COGs: COG4021 conserved hypothetical protein; InterPro IPR007537; KEGG: mxa:MXAN_5968 tRNAHis guanylyltransferase family protein; PFAM: tRNAHis guanylyltransferase; SPTR: tRNAHis guanylyltransferase family protein.
  
     0.514
kptA
RNA 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.
 
   
 0.506
AFZ06714.1
Methyltransferase type 12; TIGRFAM: 3' terminal RNA ribose 2'-O-methyltransferase Hen1; InterPro IPR013217; KEGG: ava:Ava_1594 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein.
  
     0.485
AFZ07640.1
Hypothetical protein; COGs: COG4639 kinase; KEGG: mxa:MXAN_5969 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
AFZ08485.1
PFAM: Predicted nucleotidyltransferase; COGs: COG3541 nucleotidyltransferase; InterPro IPR018775; KEGG: amr:AM1_1102 hypothetical protein; PFAM: Nucleotidyltransferase, predicted; SPTR: Putative uncharacterized protein.
  
     0.459
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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