STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05086.1Hypothetical protein; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; KEGG: ana:alr7068 hypothetical protein; SPTR: Alr7068 protein. (188 aa)    
Predicted Functional Partners:
AFZ05085.1
PFAM: Protein kinase domain; WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterProIPR017442:IPR019781:IPR002290:IPR020635:IPR 001680; KEGG: ter:Tery_1627 WD-40 repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; WD40 repeat; SPTR: Serine/threonine protein kinase with WD40 repeats.
       0.693
AFZ10105.1
PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000644:IPR003018:IPR000014:IPR001610:IPR 003661:IPR003594:IPR001789:IPR013655:IPR013767:IPR013656; KEGG: cyn:Cyan7425_1390 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; Cystathionine beta-synthase, core; PAS [...]
 
 
   0.578
AFZ05192.1
GCN5-related N-acetyltransferase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: ana:alr7052 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Alr7052 protein.
  
     0.534
AFZ08938.1
Amino acid/polyamine/organocation transporter, APC superfamily; PFAM: Amino acid permease; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: cyj:Cyan7822_1577 amino acid permease-associated protein; PFAM: Amino acid permease domain; SPTR: Amino acid permease-associated region; TC 2.A.3.
  
    0.487
AFZ05087.1
RNA polymerase, sigma subunit, ECF family; PFAM: Sigma-70, region 4; Sigma-70 region 2; Tetratricopeptide repeat; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG4941 RNA polymerase sigma factor containing a TPR repeat domain; InterPro IPR014284:IPR007627:IPR013249:IPR013105; KEGG: gvi:gll3948 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; Tetratricopeptide TPR2; SPTR: Gll3948 protein; TIGRFAM: RNA polymerase sigma-70.
       0.475
AFZ04910.1
Methyltransferase type 11; InterPro IPR013216; KEGG: syf:Synpcc7942_1092 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein.
 
     0.425
AFZ08946.1
Protein of unknown function DUF81; PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: npu:Npun_R5414 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein.
 
     0.421
AFZ06963.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: cyn:Cyan7425_0184 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase IS66.
  
     0.418
AFZ08909.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: cyn:Cyan7425_0184 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase IS66.
  
     0.418
AFZ09349.1
PFAM: Transposase IS66 family; InterPro IPR004291; KEGG: cyn:Cyan7425_0184 transposase IS66; PFAM: Transposase, IS66; SPTR: Transposase IS66.
  
     0.418
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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