STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05112.1KEGG: cyj:Cyan7822_5623 hypothetical protein; SPTR: Putative uncharacterized protein. (574 aa)    
Predicted Functional Partners:
AFZ05110.1
CRISPR-associated protein, Cmr4 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537; KEGG: cyj:Cyan7822_5621 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
   
 
 0.960
AFZ05108.1
PFAM: CRISPR-associated protein; KEGG: cyn:Cyan7425_5328 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.946
AFZ05109.1
PFAM: CRISPR-associated protein (Cas_Cmr3); KEGG: cyn:Cyan7425_5329 hypothetical protein; SPTR: Putative uncharacterized protein.
     
 0.832
AFZ05113.1
KEGG: cyn:Cyan7425_5333 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.790
AFZ05111.1
KEGG: cyj:Cyan7822_5622 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.785
AFZ05452.1
KEGG: chl:Chy400_2445 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.774
AFZ07307.1
CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; InterPro IPR013407; KEGG: naz:Aazo_2384 Crm2 family CRISPR-associated protein; SPTR: CRISPR-associated protein, Crm2 family; TIGRFAM: CRISPR-associated protein Crm2.
   
 
 0.774
AFZ05107.1
KEGG: cyt:cce_0350 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.503
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.