STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05168.1Hypothetical protein; PFAM: Domain of unknown function (DUF3598); KEGG: cyn:Cyan7425_1465 hypothetical protein; SPTR: Putative uncharacterized protein. (153 aa)    
Predicted Functional Partners:
AFZ05167.1
PFAM: Protein of unknown function (DUF790); COGs: COG3372 conserved hypothetical protein; InterPro IPR008508; KEGG: ter:Tery_2122 hypothetical protein; PFAM: Protein of unknown function DUF790, endonuclease-like; SPTR: Putative uncharacterized protein.
       0.741
AFZ05169.1
PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014001; KEGG: ter:Tery_4412 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Type III restriction enzyme, res subunit.
       0.608
AFZ05166.1
PFAM: Protein of unknown function (DUF2786); KEGG: ter:Tery_0492 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.441
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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