STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05213.1WD40 repeat-containing protein; PFAM: WD domain, G-beta repeat; COGs: COG2319 FOG: WD40 repeat; InterPro IPR019781:IPR001680; KEGG: cyc:PCC7424_1167 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat; SPTR: WD-40 repeat protein. (396 aa)    
Predicted Functional Partners:
AFZ07062.1
WD-40 repeat-containing protein; PFAM: NB-ARC domain; InterPro IPR011579; KEGG: npu:Npun_F6147 WD-40 repeat-containing protein; SPTR: WD-40 repeat protein.
 
     0.882
AFZ07124.1
ATPase; PFAM: NB-ARC domain; KEGG: ter:Tery_2292 ATPase; SPTR: WD-repeat protein (Modular protein); manually curated.
 
      0.794
AFZ04842.1
ATPase; PFAM: NB-ARC domain; InterPro IPR011579; KEGG: ter:Tery_2292 ATPase; SPTR: Putative WD-repeat protein.
 
      0.745
AFZ08865.1
ATPase; PFAM: NB-ARC domain; InterPro IPR011579; KEGG: ter:Tery_2292 ATPase; SPTR: WD-repeat protein (Modular protein).
 
      0.744
AFZ07699.1
PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442:IPR002290; KEGG: cyc:PCC7424_0943 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; SPTR: Serine/threonine protein kinase.
 
     0.730
AFZ07923.1
KEGG: npu:Npun_F0765 WD-40 repeat-containing protein; SPTR: WD-40 repeat protein.
 
  
  0.726
AFZ10366.1
ATPase; PFAM: NB-ARC domain; InterPro IPR011579; KEGG: ter:Tery_2292 ATPase; SPTR: Putative ATPase.
 
      0.683
AFZ05214.1
WD-40 repeat-containing protein; PFAM: Caspase domain; WD domain, G-beta repeat; WD40-like Beta Propeller Repeat; NACHT domain; COGs: COG2319 FOG: WD40 repeat; InterProIPR006530:IPR011600:IPR019781:IPR011659:IPR 001680; KEGG: mar:MAE_54670 WD repeat-containing protein; PFAM: WD40 repeat, subgroup; Peptidase C14, caspase catalytic; WD40-like Beta Propeller; SMART: WD40 repeat; SPTR: Putative Peptidase C14, caspase catalytic subunit p20.
 
    
0.679
AFZ05282.1
PFAM: Protein kinase domain; GUN4-like; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290:IPR020635:IPR017442:IPR008629; KEGG: ana:alr4949 serine/threonine kinase; PFAM: GUN4-like; Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; SPTR: GUN4-like family.
 
     0.668
AFZ06873.1
PFAM: NB-ARC domain; InterPro IPR002182; KEGG: npu:Npun_F5300 WD-40 repeat-containing protein; PFAM: NB-ARC; SPTR: Putative uncharacterized protein.
 
     0.653
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.