STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05223.1PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ana:all1547 ATP-binding protein of ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related. (223 aa)    
Predicted Functional Partners:
AFZ09242.1
PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ter:Tery_4901 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein.
 
 0.973
AFZ07546.1
PFAM: BioY family; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: naz:Aazo_2329 BioY protein; PFAM: BioY protein; SPTR: BioY protein.
   
 0.950
AFZ07422.1
Polyamine-transporting ATPase; PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: npu:Npun_R4551 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related.
  
  
 
0.850
AFZ04722.1
PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: npu:Npun_F6158 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein.
  
 
 0.713
AFZ10227.1
PFAM: Cobalt transport protein; TIGRFAM: cobalt ABC transporter, permease protein CbiQ; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR012809:IPR003339; KEGG: ava:Ava_1757 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; TIGRFAM: Cobalt ABC transporter CbiQ, permease subunit.
  
 
 0.713
AFZ05221.1
PFAM: Protein of unknown function (DUF3531); KEGG: npu:Npun_F5484 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.682
AFZ06303.1
KEGG: npu:Npun_R4229 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.681
rpsE
SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
 
    0.578
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
    0.577
AFZ04973.1
Fe(3+)-transporting ATPase; PFAM: ABC transporter; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: npu:Npun_F2655 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein.
 
    
0.559
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.