STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05285.1KEGG: rrs:RoseRS_3426 hypothetical protein; SPTR: Putative uncharacterized protein. (74 aa)    
Predicted Functional Partners:
AFZ05283.1
KEGG: ecv:APECO1_2645 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ05284.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: cyj:Cyan7822_5146 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
       0.773
AFZ05282.1
PFAM: Protein kinase domain; GUN4-like; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290:IPR020635:IPR017442:IPR008629; KEGG: ana:alr4949 serine/threonine kinase; PFAM: GUN4-like; Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; SPTR: GUN4-like family.
       0.613
AFZ05286.1
SpoVT/AbrB domain-containing protein; InterPro IPR007159; KEGG: mar:MAE_02330 PemI-like suppressor; SMART: Transcription regulator AbrB/SpoV, predicted; SPTR: PemI-like suppressor.
       0.500
AFZ05287.1
Transcriptional modulator of MazE/toxin, MazF; PFAM: PemK-like protein; COGs: COG2337 Growth inhibitor; InterPro IPR003477; KEGG: gvi:glr0096 cell growth regulatory protein; PFAM: PemK-like protein; SPTR: Cell growth regulatory protein; manually curated.
       0.500
AFZ07459.1
KEGG: nhl:Nhal_2304 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.425
AFZ08973.1
KEGG: cyj:Cyan7822_1248 hypothetical protein; SPTR: Similar to tr|Q027V1|Q027V1_SOLUE Hypothetical protein.
  
     0.411
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.