STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05298.1SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044:IPR001343; KEGG: amr:AM1_4208 type I secretion target domain/SCP-like extracellular domain-containing protein; PFAM: CAP domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein. (427 aa)    
Predicted Functional Partners:
AFZ07826.1
SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: cyj:Cyan7822_1284 SCP-like extracellular; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1-like protein.
  
     0.691
AFZ05299.1
KEGG: spl:Spea_1754 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.631
AFZ10259.1
PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: cyh:Cyan8802_2856 secretion protein HlyD family protein; PFAM: Secretion protein HlyD; SPTR: Auxiliary transport protein, MFP family.
  
    0.504
AFZ05300.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ter:Tery_2239 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: HEAT repeat-containing PBS lyase.
       0.479
AFZ05297.1
Hypothetical protein; COGs: COG0563 Adenylate kinase and related kinase; KEGG: ana:all3160 hypothetical protein; SPTR: All3160 protein.
       0.461
AFZ07719.1
PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: ter:Tery_3864 ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; SPTR: ComEC/Rec2-related protein; TIGRFAM: ComEC/Rec2-related protein.
 
  
 0.461
AFZ07736.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain; COGs: COG4995 conserved hypothetical protein; InterPro IPR008638:IPR011102; KEGG: cyj:Cyan7822_1017 filamentous hemagglutinin family outer membrane protein; PFAM: Filamentous haemagglutinin, N-terminal, bacterial; SMART: Signal transduction histidine kinase, HWE region; SPTR: Haemagglutination activity domain protein; TIGRFAM: Filamentous haemagglutinin, N-terminal, bacterial.
  
  
 0.444
AFZ08356.1
PFAM: Hemolysin-type calcium-binding repeat (2 copies); InterPro IPR001343; KEGG: cyt:cce_2195 hypothetical protein; PFAM: Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein.
 
 
 
0.400
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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