Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFZ05298.1 | AFZ05299.1 | Osc7112_0708 | Osc7112_0709 | SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044:IPR001343; KEGG: amr:AM1_4208 type I secretion target domain/SCP-like extracellular domain-containing protein; PFAM: CAP domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein. | KEGG: spl:Spea_1754 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.631 |
AFZ05298.1 | AFZ05300.1 | Osc7112_0708 | Osc7112_0710 | SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044:IPR001343; KEGG: amr:AM1_4208 type I secretion target domain/SCP-like extracellular domain-containing protein; PFAM: CAP domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein. | PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ter:Tery_2239 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: HEAT repeat-containing PBS lyase. | 0.479 |
AFZ05299.1 | AFZ05298.1 | Osc7112_0709 | Osc7112_0708 | KEGG: spl:Spea_1754 hypothetical protein; SPTR: Putative uncharacterized protein. | SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044:IPR001343; KEGG: amr:AM1_4208 type I secretion target domain/SCP-like extracellular domain-containing protein; PFAM: CAP domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein. | 0.631 |
AFZ05299.1 | AFZ05300.1 | Osc7112_0709 | Osc7112_0710 | KEGG: spl:Spea_1754 hypothetical protein; SPTR: Putative uncharacterized protein. | PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ter:Tery_2239 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: HEAT repeat-containing PBS lyase. | 0.578 |
AFZ05300.1 | AFZ05298.1 | Osc7112_0710 | Osc7112_0708 | PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ter:Tery_2239 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: HEAT repeat-containing PBS lyase. | SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; Hemolysin-type calcium-binding repeat (2 copies); COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044:IPR001343; KEGG: amr:AM1_4208 type I secretion target domain/SCP-like extracellular domain-containing protein; PFAM: CAP domain; Haemolysin-type calcium-binding repeat; SPTR: Putative uncharacterized protein. | 0.479 |
AFZ05300.1 | AFZ05299.1 | Osc7112_0710 | Osc7112_0709 | PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: ter:Tery_2239 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: HEAT repeat-containing PBS lyase. | KEGG: spl:Spea_1754 hypothetical protein; SPTR: Putative uncharacterized protein. | 0.578 |