STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05310.1Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG5305 membrane protein; InterPro IPR003342; KEGG: ava:Ava_2657 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: Putative uncharacterized protein. (538 aa)    
Predicted Functional Partners:
AFZ08478.1
PFAM: TrkA-N domain; COGs: COG1226 Kef-type K+ transport systems predicted NAD-binding component; InterPro IPR003148; KEGG: ter:Tery_4032 TrkA-N; PFAM: Regulator of K+ conductance, N-terminal; SPTR: TrkA-N.
  
     0.719
AFZ08425.1
PFAM: Heavy-metal-associated domain; InterPro IPR006121; KEGG: cyc:PCC7424_0117 heavy metal transport/detoxification protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein.
  
     0.615
AFZ09740.1
PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3, subtype CYANO; COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR014001:IPR017575:IPR011545; KEGG: npu:Npun_R2696 DEAD/DEAH box helicase domain-containing protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: DEAD/DEAH box helicase domain protein; TIGRFAM: CRISPR-associated helicase, Cyano-type.
  
     0.549
AFZ05093.1
KEGG: syn:sll1642 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.516
AFZ05643.1
PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: ana:all2776 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase.
  
     0.482
AFZ08703.1
PFAM: Protein of unknown function (DUF433); KEGG: cyh:Cyan8802_3525 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.481
AFZ07996.1
KEGG: mar:MAE_18210 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.476
AFZ09288.1
PFAM: Bacterial pre-peptidase C-terminal domain; InterPro IPR007280; KEGG: ava:Ava_1636 peptidase; PFAM: Peptidase, C-terminal, archaeal/bacterial; SPTR: Putative uncharacterized protein.
  
     0.460
AFZ06033.1
PFAM: Orange carotenoid protein, N-terminal; InterPro IPR015233; KEGG: ana:alr4783 hypothetical protein; PFAM: Orange carotenoid-binding protein, N-terminal; SPTR: Putative uncharacterized protein.
  
     0.454
AFZ09947.1
KEGG: npu:Npun_R4714 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.452
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.