STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05362.1KEGG: xac:XAC3231 hypothetical protein; SPTR: Putative uncharacterized protein. (73 aa)    
Predicted Functional Partners:
AFZ05360.1
Hypothetical protein; KEGG: ptr:451002 similar to very large inducible GTPase-1; SPTR: Putative uncharacterized protein.
       0.773
AFZ05361.1
Hypothetical protein; KEGG: sit:TM1040_0336 major facilitator transporter; SPTR: Major facilitator superfamily protein.
       0.773
AFZ05363.1
KEGG: svi:Svir_19480 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ05364.1
KEGG: vsp:VS_1367 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
AFZ05365.1
KEGG: ana:alr3224 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.430
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.