STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ05375.1PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); COGs: COG2094 3-methyladenine DNA glycosylase; HAMAP: Methylpurine-DNA glycosylase (MPG); InterPro IPR003180; KEGG: ter:Tery_2004 DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: Putative 3-methyladenine DNA glycosylase; TIGRFAM: Methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family. (203 aa)    
Predicted Functional Partners:
AFZ04843.1
Exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR000097:IPR004808:IPR005135; KEGG: ter:Tery_3564 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease III; TIGRFAM: AP endonuclease, family 1; Exodeoxyribonuclease III xth.
    
 0.742
AFZ05374.1
Hypothetical protein; KEGG: ecb:100071754 similar to Centriolin (110 kDa centrosomal protein) (Centrosomal protein 1); SPTR: Putative uncharacterized protein.
       0.620
AFZ05376.1
KEGG: cyt:cce_1482 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.586
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
   
 0.405
Your Current Organism:
Oscillatoria nigroviridis
NCBI taxonomy Id: 179408
Other names: O. nigro-viridis PCC 7112, Oscillatoria nigro-viridis PCC 7112, Oscillatoria sp. PCC 7112
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.